Experiment state

2023-12-15 15:12:14 +01:00
parent c7d4a50a85
commit 409ec8b4c2
10 changed files with 199 additions and 4 deletions
@@ -5,7 +5,7 @@
 #SBATCH --account=hkf6
 #SBATCH --partition=develbooster
 #SBATCH --nodes=1
-#SBATCH --ntasks-per-node=1
+#SBATCH --ntasks=1
 #SBATCH --cpus-per-task=48
 #SBATCH --time=01:00:00
 #SBATCH --output=logs/build-cuda-%j.log
@@ -5,7 +5,7 @@
 #SBATCH --account=hkf6
 #SBATCH --partition=develbooster
 #SBATCH --nodes=1
-#SBATCH --ntasks-per-node=1
+#SBATCH --ntasks=1
 #SBATCH --cpus-per-task=48
 #SBATCH --time=01:00:00
 #SBATCH --output=logs/build-nocuda-%j.log
@@ -9,7 +9,7 @@
 #SBATCH --nodes=1
 # Number of MPI processes
 # TODO: Change the config and set to this the maximum of 48
-#SBATCH --ntasks-per-node=16
+#SBATCH --ntasks=16
 #SBATCH --cpus-per-task=1
 # For now, we are using a single GPU only
 #SBATCH --gres=gpu:1
@@ -9,7 +9,7 @@
 #SBATCH --nodes=1
 # Number of MPI processes
 # TODO: Change the config and set to this the maximum of 48
-#SBATCH --ntasks-per-node=16
+#SBATCH --ntasks=16
 #SBATCH --cpus-per-task=1
 #SBATCH --time=01:00:00
 #SBATCH --output=logs/nocuda-%j.log
@@ -0,0 +1,26 @@
+#!/usr/bin/env bash
+
+#SBATCH --job-name=varied-fillings-nocuda
+# Forschergruppe Schug
+#SBATCH --account=hkf6
+# 48 Cores, 512GiB RAM, 4x NVIDIA A100 GPUs
+#SBATCH --partition=booster
+# Right now we're using a single node
+#SBATCH --nodes=1
+#SBATCH --ntasks=48
+#SBATCH --cpus-per-task=1
+#SBATCH --time=02:00:00
+#SBATCH --output=logs/varied-fillings-nocuda-%A-%3a.log
+#SBATCH --error=logs/varied-fillings-nocuda-%A-%3a.log
+#SBATCH --array=0-100:10
+
+IDENT=$(printf "%03d" "${SLURM_ARRAY_TASK_ID}")
+SOURCE_DIR=/p/project/cellsinsilico/paulslustigebude
+OUTPUT_DIR="/p/scratch/cellsinsilico/paul/nastja-out/varied-fillings-nocuda-${IDENT}"
+
+mkdir -p "${OUTPUT_DIR}"
+source "${SOURCE_DIR}/activate-nastja-modules"
+
+srun "${SOURCE_DIR}/nastja/build-nocuda/nastja" \
+  -c "${SOURCE_DIR}/ma/experiments/generated/varied-fillings-${IDENT}.json" \
+  -o "${OUTPUT_DIR}"