{ "#Testing": { "description": "Minimal config for debugging CUDA code" }, "Application": "Cells", "Geometry": { "blocksize": [5, 5, 5], "blockcount": [1, 1, 1] }, "Settings": { "timesteps": 3, "randomseed": 42 }, "Filling": { "cells": [ { "_comment": "This is for the dynamic ECM", "shape": "cube", "box": [ [0, 0, 0], [4, 2, 4] ], "value": 0, "celltype": 0 }, { "shape": "cube", "box": [ [1, 1, 1], [3, 3, 3] ], "celltype": 2 } ] }, "CellsInSilico": { "liquid": 1, "adhesion": { "matrix": [ [0, 0, 0, 0], [0, 20, 5, 5], [0, 5, 10, 5], [0, 5, 5, 5] ] }, "temperature": 15, "volume": { "default": { "storage": "const", "value": 300 }, "lambda": { "storage": "const", "value": 10 } }, "potential": { "direction": [1, 1, 0], "coupling": [0, 150, 100, 50] }, "surface": { "default": { "storage": "const", "value": 400 }, "lambda": { "storage": "const", "value": 10 } }, "cleaner": { "killdistance": 100 }, "checkerboard": "00", "energyfunctions": ["Volume00", "Surface00", "Adhesion00", "Potential00", "DynamicECM00"], "centerofmass": { "steps": 10 }, "dynamicecm": { "enabled": true, "ecmCellID": 0, "stepsPerMcs": 1, "pushSteps": 1, "deltat": 0.1, "eta": 0.5 } }, "Writers": { "ParallelVTK_Displacement": { "writer": "ParallelVtkImage", "outputtype": "Float32", "field": "dynamicecm", "steps": 1 } }, "WriteActions": ["ParallelVTK_Displacement"] }