Update small.json for CUDA testing

This commit is contained in:
Paul Brinkmeier 2024-01-17 18:46:35 +01:00
parent 744512e4b5
commit 6c8c93589b

View File

@ -1,21 +1,40 @@
{
"#Testing": {
"description": "Cellular Potts Model with dynamic ECM"
"description": "Minimal config for debugging CUDA code"
},
"Application": "Cells",
"Geometry": {
"blocksize": [15, 15, 15],
"blocksize": [5, 5, 5],
"blockcount": [1, 1, 1]
},
"Settings": {
"timesteps": 100,
"timesteps": 1,
"randomseed": 42
},
"Filling": {
"cells": [
{
"_comment": "This is for the dynamic ECM",
"shape": "cube",
"box": [
[0, 0, 0],
[4, 2, 4]
],
"value": 0,
"celltype": 0
},
{
"shape": "cube",
"box": [
[1, 1, 1],
[3, 3, 3]
],
"celltype": 2
}
]
},
"CellsInSilico": {
"liquid": 1,
"adhesion": {
"matrix": [
[0, 0, 0, 0],
@ -53,12 +72,15 @@
"killdistance": 100
},
"checkerboard": "00",
"energyfunctions": ["Volume00", "Surface00", "Adhesion00", "Potential00"],
"energyfunctions": ["Volume00", "Surface00", "Adhesion00", "Potential00", "DynamicECM00"],
"centerofmass": {
"steps": 10
},
"dynamicecm": {
"enabled": true,
"ecmCellID": 0,
"stepsPerMcs": 1,
"pushSteps": 1,
"deltat": 0.1,
"eta": 0.5
}
@ -67,7 +89,7 @@
"ParallelVTK_Displacement": {
"writer": "ParallelVtkImage",
"outputtype": "Float32",
"field": "dynamicecm_displacement",
"field": "dynamicecm",
"steps": 1
}
},